=> Bootstrap dependency digest>=20010302: found digest-20111104 WARNING: [license.mk] Every package should define a LICENSE. ===> Skipping vulnerability checks. WARNING: No /home/asau/pkg/var/db/pkg/pkg-vulnerabilities file found. WARNING: To fix run: `/home/asau/pkg/sbin/pkg_admin -K /home/asau/pkg/var/db/pkg fetch-pkg-vulnerabilities'. ===> Installing for py26-pysph-0.9 => Generating pre-install file lists => Creating installation directories (cd /home/asau/tmp/wip/py-pysph/work/PySPH-0.9beta/ && /usr/bin/env PKGSRC_PYTHON_NO_EGG=defined DESTDIR=/home/asau/tmp/wip/py-pysph/work/.destdir USETOOLS=no PTHREAD_CFLAGS=\ -pthread\ PTHREAD_LDFLAGS=\ -pthread PTHREAD_LIBS= PTHREADBASE=/usr DL_CFLAGS=\ -pthread\ DL_LDFLAGS=\ -pthread DL_LIBS= PYTHON=/home/asau/pkg/bin/python2.6 CC=cc CFLAGS=-I/home/asau/pkg/include\ -I/usr/include CPPFLAGS=-I/home/asau/pkg/include\ -I/usr/include CXX=c++ CXXFLAGS=-I/home/asau/pkg/include\ -I/usr/include COMPILER_RPATH_FLAG=-Wl,-R F77=f77 FC=f77 FFLAGS=-O LANG=C LC_COLLATE=C LC_CTYPE=C LC_MESSAGES=C LC_MONETARY=C LC_NUMERIC=C LC_TIME=C LDFLAGS=-L/home/asau/pkg/lib\ -Wl,-R/home/asau/pkg/lib\ -L/usr/lib\ -Wl,-R/usr/lib LINKER_RPATH_FLAG=-R PATH=/home/asau/tmp/wip/py-pysph/work/.wrapper/bin:/home/asau/tmp/wip/py-pysph/work/.buildlink/bin:/home/asau/tmp/wip/py-pysph/work/.gcc/bin:/home/asau/tmp/wip/py-pysph/work/.tools/bin:/home/asau/pkg/bin:/home/asau/bin:/bin:/sbin:/usr/bin:/usr/sbin:/usr/X11R7/bin:/usr/X11R6/bin:/usr/pkg/bin:/usr/pkg/sbin:/usr/games:/usr/local/bin:/usr/local/sbin:/home/asau/pkg/bin:/home/asau/pkg/bin PREFIX=/home/asau/pkg PKG_SYSCONFDIR=/home/asau/pkg/etc HOME=/home/asau/tmp/wip/py-pysph/work/.home CPP=cpp LINK_ALL_LIBGCC_HACK= LOCALBASE=/home/asau/pkg NO_WHOLE_ARCHIVE_FLAG=-Wl,--no-whole-archive WHOLE_ARCHIVE_FLAG=-Wl,--whole-archive X11BASE=/home/asau/pkg X11PREFIX=/home/asau/pkg PKGMANDIR=man PKGINFODIR=info MAKECONF=/dev/null OBJECT_FMT=ELF USETOOLS=no BSD_INSTALL_PROGRAM=/usr/bin/install\ -c\ -s\ -o\ asau\ -g\ users\ -m\ 755 BSD_INSTALL_SCRIPT=/usr/bin/install\ -c\ -o\ asau\ -g\ users\ -m\ 755 BSD_INSTALL_LIB=/usr/bin/install\ -c\ -o\ asau\ -g\ users\ -m\ 755 BSD_INSTALL_DATA=/usr/bin/install\ -c\ -o\ asau\ -g\ users\ -m\ 644 BSD_INSTALL_MAN=/usr/bin/install\ -c\ -o\ asau\ -g\ users\ -m\ 644 BSD_INSTALL=/usr/bin/install BSD_INSTALL_PROGRAM_DIR=/usr/bin/install\ -d\ -o\ asau\ -g\ users\ -m\ 755 BSD_INSTALL_SCRIPT_DIR=/usr/bin/install\ -d\ -o\ asau\ -g\ users\ -m\ 755 BSD_INSTALL_LIB_DIR=/usr/bin/install\ -d\ -o\ asau\ -g\ users\ -m\ 755 BSD_INSTALL_DATA_DIR=/usr/bin/install\ -d\ -o\ asau\ -g\ users\ -m\ 755 BSD_INSTALL_MAN_DIR=/usr/bin/install\ -d\ -o\ asau\ -g\ users\ -m\ 755 BSD_INSTALL_GAME=/usr/bin/install\ -c\ -s\ -o\ asau\ -g\ users\ -m\ 0755 BSD_INSTALL_GAME_DATA=/usr/bin/install\ -c\ -o\ asau\ -g\ users\ -m\ 0644 BSD_INSTALL_GAME_DIR=/usr/bin/install\ -d\ -o\ asau\ -g\ users\ -m\ 0755 INSTALL_INFO= MAKEINFO=/home/asau/tmp/wip/py-pysph/work/.tools/bin/makeinfo FLEX= BISON= PKG_CONFIG= PKG_CONFIG_LIBDIR=/home/asau/tmp/wip/py-pysph/work/.buildlink/lib/pkgconfig:/home/asau/tmp/wip/py-pysph/work/.buildlink/share/pkgconfig PKG_CONFIG_LOG=/home/asau/tmp/wip/py-pysph/work/.pkg-config.log PKG_CONFIG_PATH= WRAPPER_DEBUG=no WRAPPER_UPDATE_CACHE=yes VIEWBASE=/home/asau/pkg /home/asau/pkg/bin/python2.6 setup.py "install" -c -O1 --single-version-externally-managed --root=/home/asau/tmp/wip/py-pysph/work/.destdir) not generating file source/pysph/base/carray.pxd from source/pysph/base/carray_pxd.src not generating file source/pysph/base/carray.pyx from source/pysph/base/carray_pyx.src missing cimport in module 'pysph.base.point': source/pysph/sph/sph_func.pxd missing cimport in module 'pysph.base.nnps': source/pysph/sph/sph_func.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/sph_func.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/sph_func.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/sph_func.pxd missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/sph_calc.pyx missing cimport in module 'pysph.base.nnps': source/pysph/sph/sph_calc.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/sph/sph_calc.pyx missing cimport in module 'pysph.base.carray': source/pysph/sph/sph_calc.pyx missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/sph_calc.pxd missing cimport in module 'pysph.base.nnps': source/pysph/sph/sph_calc.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/sph_calc.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/sph_calc.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/sph_calc.pxd missing cimport in module 'pysph.sph.kernel_correction': source/pysph/sph/sph_calc.pxd missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/kernel_correction.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/sph/kernel_correction.pyx missing cimport in module 'pysph.base.nnps': source/pysph/sph/kernel_correction.pyx missing cimport in module 'pysph.base.carray': source/pysph/sph/kernel_correction.pyx missing cimport in module 'pysph.sph.funcs.basic_funcs': source/pysph/sph/kernel_correction.pyx missing cimport in module 'pysph.base.carray': source/pysph/sph/kernel_correction.pxd missing cimport in module 'pysph.base.carray': source/pysph/base/fast_utils.pyx missing cimport in module 'pysph.base.carray': source/pysph/base/fast_utils.pxd missing cimport in module 'pysph.base.carray': source/pysph/base/particle_array.pyx missing cimport in module 'pysph.base.carray': source/pysph/base/particle_array.pxd missing cimport in module 'pysph.base.point': source/pysph/base/cell.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/base/cell.pyx missing cimport in module 'pysph.base.carray': source/pysph/base/cell.pyx missing cimport in module 'fast_utils': source/pysph/base/cell.pyx missing cimport in module 'pysph.base.point': source/pysph/base/cell.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/base/cell.pxd missing cimport in module 'pysph.base.carray': source/pysph/base/cell.pxd missing cimport in module 'pysph.base.point': source/pysph/base/kernels.pyx missing cimport in module 'pysph.base.point': source/pysph/base/kernels.pxd missing cimport in module 'pysph.base.carray': source/pysph/base/kernels.pxd missing cimport in module 'pysph.base.point': source/pysph/base/nnps.pyx missing cimport in module 'pysph.base.cell': source/pysph/base/nnps.pyx missing cimport in module 'pysph.base.polygon_array': source/pysph/base/nnps.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/base/nnps.pyx missing cimport in module 'pysph.base.carray': source/pysph/base/nnps.pyx missing cimport in module 'pysph.base.point': source/pysph/base/nnps.pxd missing cimport in module 'pysph.base.kernels': source/pysph/base/nnps.pxd missing cimport in module 'pysph.base.cell': source/pysph/base/nnps.pxd missing cimport in module 'pysph.base.polygon_array': source/pysph/base/nnps.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/base/nnps.pxd missing cimport in module 'pysph.base.carray': source/pysph/base/nnps.pxd missing cimport in module 'pysph.base.point': source/pysph/base/plane.pyx missing cimport in module 'pysph.base.point': source/pysph/base/plane.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/base/polygon_array.pxd missing cimport in module 'pysph.base.carray': source/pysph/base/polygon_array.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/base/geometry.pyx missing cimport in module 'point': source/pysph/base/geometry.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/basic_funcs.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/basic_funcs.pyx missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/basic_funcs.pxd missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/basic_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/basic_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/basic_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/basic_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/position_funcs.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/position_funcs.pyx missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/position_funcs.pyx missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/position_funcs.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/boundary_funcs.pyx missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/boundary_funcs.pxd missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/boundary_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/boundary_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/boundary_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/boundary_funcs.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/external_force.pyx missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/external_force.pxd missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/external_force.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/external_force.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/external_force.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/density_funcs.pyx missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/density_funcs.pyx missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/density_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/density_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/density_funcs.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/energy_funcs.pyx missing cimport in module 'common': source/pysph/sph/funcs/energy_funcs.pyx missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/energy_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/energy_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/energy_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/energy_funcs.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/viscosity_funcs.pyx missing cimport in module 'common': source/pysph/sph/funcs/viscosity_funcs.pyx missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/viscosity_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/viscosity_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/viscosity_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/viscosity_funcs.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/pressure_funcs.pyx missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/pressure_funcs.pxd missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/pressure_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/pressure_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/pressure_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/pressure_funcs.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/xsph_funcs.pyx missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/xsph_funcs.pyx missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/xsph_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/xsph_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/xsph_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/xsph_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/eos_funcs.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/eos_funcs.pyx missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/eos_funcs.pyx missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/eos_funcs.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/adke_funcs.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/adke_funcs.pyx missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/adke_funcs.pxd missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/adke_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/adke_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/adke_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/adke_funcs.pxd missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/arithmetic_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/arithmetic_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/arithmetic_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/arithmetic_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/stress_funcs.pyx missing cimport in module 'linalg': source/pysph/sph/funcs/stress_funcs.pyx missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/stress_funcs.pxd missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/stress_funcs.pxd missing cimport in module 'pysph.sph.funcs.pressure_funcs': source/pysph/sph/funcs/stress_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/stress_funcs.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/stress_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/stress_funcs.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/linalg.pyx missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/linalg.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/gsph_funcs.pyx missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/gsph_funcs.pyx missing cimport in module 'euler1d': source/pysph/sph/funcs/gsph_funcs.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/gsph_funcs.pyx missing cimport in module 'common': source/pysph/sph/funcs/gsph_funcs.pyx missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/gsph_funcs.pxd missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/gsph_funcs.pxd missing cimport in module 'pysph.base.point': source/pysph/sph/funcs/test_funcs.pyx missing cimport in module 'pysph.base.kernels': source/pysph/sph/funcs/test_funcs.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/sph/funcs/test_funcs.pyx missing cimport in module 'pysph.base.carray': source/pysph/sph/funcs/test_funcs.pyx missing cimport in module 'pysph.sph.sph_func': source/pysph/sph/funcs/test_funcs.pxd missing cimport in module 'pysph.base.kernels': source/pysph/solver/particle_generator.pyx missing cimport in module 'pysph.base.particle_array': source/pysph/solver/particle_generator.pyx missing cimport in module 'pysph.base.kernels': source/pysph/solver/particle_generator.pxd missing cimport in module 'pysph.base.particle_array': source/pysph/solver/particle_generator.pxd Compiling source/pysph/sph/sph_func.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/sph/sph_calc.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/base/carray.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/base/point.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/base/particle_array.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/base/cell.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/base/kernels.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/base/nnps.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/base/plane.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/base/geometry.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/base/linked_list_functions.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/sph/funcs/adke_funcs.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/libc/math.pxd. Compiling source/pysph/sph/funcs/stress_funcs.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/sph/funcs/linalg.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Compiling source/pysph/sph/funcs/euler1d.pyx because it depends on /home/asau/pkg/lib/python2.6/site-packages/Cython/Includes/numpy.pxd. Error compiling Cython file: ------------------------------------------------------------ ... r[0] = self.data.x r[1] = self.data.y r[2] = self.data.z return r cpdef inline double norm(Point self): ^ ------------------------------------------------------------ source/pysph/base/point.pyx:156:10: Only final types can have final Python (def/cpdef) methods Traceback (most recent call last): File "setup.py", line 153, in ext_modules = cythonize(ext_modules,nthreads=ncpu,include_path=inc_dirs) File "/home/asau/pkg/lib/python2.6/site-packages/Cython/Build/Dependencies.py", line 631, in cythonize pool.map(cythonize_one_helper, to_compile) File "/home/asau/pkg/lib/python2.6/multiprocessing/pool.py", line 148, in map return self.map_async(func, iterable, chunksize).get() File "/home/asau/pkg/lib/python2.6/multiprocessing/pool.py", line 422, in get raise self._value Cython.Compiler.Errors.CompileError: source/pysph/base/point.pyx *** Error code 1 Stop. bmake: stopped in /usr/home/asau/pkgsrc/wip/py-pysph *** Error code 1 Stop. bmake: stopped in /usr/home/asau/pkgsrc/wip/py-pysph